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A novel approach for combining the metagenome, metaresistome, metareplicome and causal inference to determine the microbes and their antibiotic resistance gene repertoire that contribute to dysbiosis

The use of whole metagenomic data to infer the relative abundance of all its microbes is well established. The same data can be used to determine the replication rate of all eubacterial taxa with circular chromosomes. Despite their availability, the replication rate profiles (metareplicome) have not...

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Detalles Bibliográficos
Autores principales: Stebliankin, Vitalii, Sazal, Musfiqur, Valdes, Camilo, Mathee, Kalai, Narasimhan, Giri
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9837561/
https://www.ncbi.nlm.nih.gov/pubmed/36748547
http://dx.doi.org/10.1099/mgen.0.000899