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A novel approach for combining the metagenome, metaresistome, metareplicome and causal inference to determine the microbes and their antibiotic resistance gene repertoire that contribute to dysbiosis
The use of whole metagenomic data to infer the relative abundance of all its microbes is well established. The same data can be used to determine the replication rate of all eubacterial taxa with circular chromosomes. Despite their availability, the replication rate profiles (metareplicome) have not...
Autores principales: | Stebliankin, Vitalii, Sazal, Musfiqur, Valdes, Camilo, Mathee, Kalai, Narasimhan, Giri |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Microbiology Society
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9837561/ https://www.ncbi.nlm.nih.gov/pubmed/36748547 http://dx.doi.org/10.1099/mgen.0.000899 |
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