Cargando…

Initiation at AUGUG and GUGUG sequences can lead to translation of overlapping reading frames in E. coli

During initiation, the ribosome is tasked to efficiently recognize open reading frames (ORFs) for accurate and fast translation of mRNAs. A critical step is start codon recognition, which is modulated by initiation factors, mRNA structure, a Shine Dalgarno (SD) sequence and the start codon itself. W...

Descripción completa

Detalles Bibliográficos
Autores principales:	Kohl, Maximilian P, Kompatscher, Maria, Clementi, Nina, Holl, Lena, Erlacher, Matthias D
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2022
Materias:	Molecular Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9841429/ https://www.ncbi.nlm.nih.gov/pubmed/36546769 http://dx.doi.org/10.1093/nar/gkac1175

Ejemplares similares

HexSE: Simulating evolution in overlapping reading frames
por: Muñoz-Baena, Laura, et al.
Publicado: (2023)

Monitoring translation in all reading frames downstream of weak stop codons provides mechanistic insights into the impact of nucleotide and cellular contexts
por: Loughran, Gary, et al.
Publicado: (2022)

Selective Constraint on the Upstream Open Reading Frames That Overlap with Coding Sequences in Animals
por: Hsu, Ming-Kung, et al.
Publicado: (2012)

Hydrophobic Alpha-Helical Short Peptides in Overlapping Reading Frames of the Coronavirus Genome
por: Okura, Takashi, et al.
Publicado: (2022)

An upstream open reading frame within an IRES controls expression of a specific VEGF-A isoform
por: Bastide, Amandine, et al.
Publicado: (2008)

The major form of hepatitis C virus alternate reading frame protein is suppressed by core protein expression
por: Wolf, Marie, et al.
Publicado: (2008)

Translational buffering by ribosome stalling in upstream open reading frames
por: Bottorff, Ty A., et al.
Publicado: (2022)

Translation of ABCE1 Is Tightly Regulated by Upstream Open Reading Frames in Human Colorectal Cells
por: Silva, Joana, et al.
Publicado: (2021)

Oscillating Evolution of a Mammalian Locus with Overlapping Reading Frames: An XLαs/ALEX Relay
por: Nekrutenko, Anton, et al.
Publicado: (2005)

Two Family B DNA Polymerases From Aeropyrum pernix, Based on Revised Translational Frames
por: Daimon, Katsuya, et al.
Publicado: (2018)

Translation of small downstream ORFs enhances translation of canonical main open reading frames
por: Wu, Qiushuang, et al.
Publicado: (2020)

Translation of upstream open reading frames in a model of neuronal differentiation
por: Rodriguez, Caitlin M., et al.
Publicado: (2019)

Distinct types of short open reading frames are translated in plant cells
por: Fesenko, Igor, et al.
Publicado: (2019)

Temperature-dependent regulation of upstream open reading frame translation in S. cerevisiae
por: Kulkarni, Shardul D., et al.
Publicado: (2019)

The Translation of Non-Canonical Open Reading Frames Controls Mucosal Immunity
por: Jackson, Ruaidhrí, et al.
Publicado: (2018)

Persistence of Ambigrammatic Narnaviruses Requires Translation of the Reverse Open Reading Frame
por: Retallack, Hanna, et al.
Publicado: (2021)

Translational read-through promotes aggregation and shapes stop codon identity
por: Kramarski, Lior, et al.
Publicado: (2020)

IRES-dependent ribosome repositioning directs translation of a +1 overlapping ORF that enhances viral infection
por: Kerr, Craig H, et al.
Publicado: (2018)

An antisense promoter in mouse L1 retrotransposon open reading frame-1 initiates expression of diverse fusion transcripts and limits retrotransposition
por: Li, Jingfeng, et al.
Publicado: (2014)

Frame overlap Bragg edge imaging
por: Busi, Matteo, et al.
Publicado: (2020)

Comprehensive translational control of tyrosine kinase expression by upstream open reading frames
por: Wethmar, K, et al.
Publicado: (2016)

Extensive translation of small Open Reading Frames revealed by Poly-Ribo-Seq
por: Aspden, Julie L, et al.
Publicado: (2014)

A Coding Sequence-Embedded Principle Governs Translational Reading Frame Fidelity
por: Wan, Ji, et al.
Publicado: (2018)

Translational control of murine adiponectin expression by an upstream open reading frame element
por: Vasu, Kommireddy, et al.
Publicado: (2023)

Frame-disrupting mutations elicit pre-mRNA accumulation independently of frame disruption
por: Imam, J. Saadi, et al.
Publicado: (2010)

A profusion of upstream open reading frame mechanisms in polyamine-responsive translational regulation
por: Ivanov, Ivaylo P., et al.
Publicado: (2010)

An Upstream Open Reading Frame Modulates Ebola Virus Polymerase Translation and Virus Replication
por: Shabman, Reed S., et al.
Publicado: (2013)

Translation of the human erythropoietin transcript is regulated by an upstream open reading frame in response to hypoxia
por: Barbosa, Cristina, et al.
Publicado: (2014)

Structural determinants of an internal ribosome entry site that direct translational reading frame selection
por: Ren, Qian, et al.
Publicado: (2014)

Synergetic regulation of translational reading-frame switch by ligand-responsive RNAs in mammalian cells
por: Hsu, Hsiu-Ting, et al.
Publicado: (2014)

Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling
por: Raj, Anil, et al.
Publicado: (2016)

uORF-Tools—Workflow for the determination of translation-regulatory upstream open reading frames
por: Scholz, Anica, et al.
Publicado: (2019)

Pervasive translation of small open reading frames in plant long non-coding RNAs
por: Sruthi, K. Bharathan, et al.
Publicado: (2022)

Overlapping open reading frames strongly reduce human and yeast STN1 gene expression and affect telomere function
por: Torrance, Victoria, et al.
Publicado: (2018)

The flip-flop configuration of the PABP-dimer leads to switching of the translation function
por: Gu, Sohyun, et al.
Publicado: (2021)

Spotlight on alternative frame coding: Two long overlapping genes in Pseudomonas aeruginosa are translated and under purifying selection
por: Kreitmeier, Michaela, et al.
Publicado: (2022)

Translation reinitiation at alternative open reading frames regulates gene expression in an integrated stress response
por: Lu, Phoebe D., et al.
Publicado: (2004)

Direct Detection of Alternative Open Reading Frames Translation Products in Human Significantly Expands the Proteome
por: Vanderperre, Benoît, et al.
Publicado: (2013)

An Upstream Open Reading Frame Represses Translation of Chicken PPARγ Transcript Variant 1
por: Chu, Yankai, et al.
Publicado: (2020)

Active role of elongation factor G in maintaining the mRNA reading frame during translation
por: Peng, Bee-Zen, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_etevnjaatke304btd9smed3imb