SAMStat 2: quality control for next generation sequencing data

MOTIVATION: SAMStat is an efficient program to extract quality control metrics from fastq and SAM/BAM files. A distinguishing feature is that it displays sequence composition, base quality composition and mapping error profiles split by mapping quality. This allows users to rapidly identify reasons...

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Detalles Bibliográficos
Autor principal: Lassmann, Timo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9850270/
https://www.ncbi.nlm.nih.gov/pubmed/36637208
http://dx.doi.org/10.1093/bioinformatics/btad019

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9850270/
https://www.ncbi.nlm.nih.gov/pubmed/36637208
http://dx.doi.org/10.1093/bioinformatics/btad019

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