Learning single-cell chromatin accessibility profiles using meta-analytic marker genes

MOTIVATION: Single-cell assay for transposase accessible chromatin using sequencing (scATAC-seq) is a valuable resource to learn cis-regulatory elements such as cell-type specific enhancers and transcription factor binding sites. However, cell-type identification of scATAC-seq data is known to be ch...

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Detalles Bibliográficos
Autores principales: Kawaguchi, Risa Karakida, Tang, Ziqi, Fischer, Stephan, Rajesh, Chandana, Tripathy, Rohit, Koo, Peter K, Gillis, Jesse
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Problem Solving Protocol
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9851328/
https://www.ncbi.nlm.nih.gov/pubmed/36549922
http://dx.doi.org/10.1093/bib/bbac541

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9851328/
https://www.ncbi.nlm.nih.gov/pubmed/36549922
http://dx.doi.org/10.1093/bib/bbac541

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