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Deciphering the Effect of Different Genetic Variants on Hippocampal Subfield Volumes in the General Population

The aim of this study was to disentangle the effects of various genetic factors on hippocampal subfield volumes using three different approaches: a biologically driven candidate gene approach, a hypothesis-free GWAS approach, and a polygenic approach, where AD risk alleles are combined with a polyge...

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Autores principales: Kirchner, Kevin, Garvert, Linda, Wittfeld, Katharina, Ameling, Sabine, Bülow, Robin, Meyer zu Schwabedissen, Henriette, Nauck, Matthias, Völzke, Henry, Grabe, Hans J., Van der Auwera, Sandra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9861136/
https://www.ncbi.nlm.nih.gov/pubmed/36674637
http://dx.doi.org/10.3390/ijms24021120
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author Kirchner, Kevin
Garvert, Linda
Wittfeld, Katharina
Ameling, Sabine
Bülow, Robin
Meyer zu Schwabedissen, Henriette
Nauck, Matthias
Völzke, Henry
Grabe, Hans J.
Van der Auwera, Sandra
author_facet Kirchner, Kevin
Garvert, Linda
Wittfeld, Katharina
Ameling, Sabine
Bülow, Robin
Meyer zu Schwabedissen, Henriette
Nauck, Matthias
Völzke, Henry
Grabe, Hans J.
Van der Auwera, Sandra
author_sort Kirchner, Kevin
collection PubMed
description The aim of this study was to disentangle the effects of various genetic factors on hippocampal subfield volumes using three different approaches: a biologically driven candidate gene approach, a hypothesis-free GWAS approach, and a polygenic approach, where AD risk alleles are combined with a polygenic risk score (PRS). The impact of these genetic factors was investigated in a large dementia-free general population cohort from the Study of Health in Pomerania (SHIP, n = 1806). Analyses were performed using linear regression models adjusted for biological and environmental risk factors. Hippocampus subfield volume alterations were found for APOE ε4, BDNF Val, and 5-HTTLPR L allele carriers. In addition, we were able to replicate GWAS findings, especially for rs17178139 (MSRB3), rs1861979 (DPP4), rs7873551 (ASTN2), and rs572246240 (MAST4). Interaction analyses between the significant SNPs as well as the PRS for AD revealed no significant results. Our results confirm that hippocampal volume reductions are influenced by genetic variation, and that different variants reveal different association patterns that can be linked to biological processes in neurodegeneration. Thus, this study underlines the importance of specific genetic analyses in the quest for acquiring deeper insights into the biology of hippocampal volume loss, memory impairment, depression, and neurodegenerative diseases.
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spelling pubmed-98611362023-01-22 Deciphering the Effect of Different Genetic Variants on Hippocampal Subfield Volumes in the General Population Kirchner, Kevin Garvert, Linda Wittfeld, Katharina Ameling, Sabine Bülow, Robin Meyer zu Schwabedissen, Henriette Nauck, Matthias Völzke, Henry Grabe, Hans J. Van der Auwera, Sandra Int J Mol Sci Article The aim of this study was to disentangle the effects of various genetic factors on hippocampal subfield volumes using three different approaches: a biologically driven candidate gene approach, a hypothesis-free GWAS approach, and a polygenic approach, where AD risk alleles are combined with a polygenic risk score (PRS). The impact of these genetic factors was investigated in a large dementia-free general population cohort from the Study of Health in Pomerania (SHIP, n = 1806). Analyses were performed using linear regression models adjusted for biological and environmental risk factors. Hippocampus subfield volume alterations were found for APOE ε4, BDNF Val, and 5-HTTLPR L allele carriers. In addition, we were able to replicate GWAS findings, especially for rs17178139 (MSRB3), rs1861979 (DPP4), rs7873551 (ASTN2), and rs572246240 (MAST4). Interaction analyses between the significant SNPs as well as the PRS for AD revealed no significant results. Our results confirm that hippocampal volume reductions are influenced by genetic variation, and that different variants reveal different association patterns that can be linked to biological processes in neurodegeneration. Thus, this study underlines the importance of specific genetic analyses in the quest for acquiring deeper insights into the biology of hippocampal volume loss, memory impairment, depression, and neurodegenerative diseases. MDPI 2023-01-06 /pmc/articles/PMC9861136/ /pubmed/36674637 http://dx.doi.org/10.3390/ijms24021120 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kirchner, Kevin
Garvert, Linda
Wittfeld, Katharina
Ameling, Sabine
Bülow, Robin
Meyer zu Schwabedissen, Henriette
Nauck, Matthias
Völzke, Henry
Grabe, Hans J.
Van der Auwera, Sandra
Deciphering the Effect of Different Genetic Variants on Hippocampal Subfield Volumes in the General Population
title Deciphering the Effect of Different Genetic Variants on Hippocampal Subfield Volumes in the General Population
title_full Deciphering the Effect of Different Genetic Variants on Hippocampal Subfield Volumes in the General Population
title_fullStr Deciphering the Effect of Different Genetic Variants on Hippocampal Subfield Volumes in the General Population
title_full_unstemmed Deciphering the Effect of Different Genetic Variants on Hippocampal Subfield Volumes in the General Population
title_short Deciphering the Effect of Different Genetic Variants on Hippocampal Subfield Volumes in the General Population
title_sort deciphering the effect of different genetic variants on hippocampal subfield volumes in the general population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9861136/
https://www.ncbi.nlm.nih.gov/pubmed/36674637
http://dx.doi.org/10.3390/ijms24021120
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