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Very large hidden genetic diversity in one single tumor: evidence for tumors-in-tumor

Despite the concern of within-tumor genetic diversity, this diversity is in fact limited by the kinship among cells in the tumor. Indeed, genomic studies have amply supported the ‘Nowell dogma’ whereby cells of the same tumor descend from a single progenitor cell. In parallel, genomic data also sugg...

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Autores principales: Chen, Bingjie, Wu, Xianrui, Ruan, Yongsen, Zhang, Yulin, Cai, Qichun, Zapata, Luis, Wu, Chung-I, Lan, Ping, Wen, Haijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9869076/
https://www.ncbi.nlm.nih.gov/pubmed/36694802
http://dx.doi.org/10.1093/nsr/nwac250
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author Chen, Bingjie
Wu, Xianrui
Ruan, Yongsen
Zhang, Yulin
Cai, Qichun
Zapata, Luis
Wu, Chung-I
Lan, Ping
Wen, Haijun
author_facet Chen, Bingjie
Wu, Xianrui
Ruan, Yongsen
Zhang, Yulin
Cai, Qichun
Zapata, Luis
Wu, Chung-I
Lan, Ping
Wen, Haijun
author_sort Chen, Bingjie
collection PubMed
description Despite the concern of within-tumor genetic diversity, this diversity is in fact limited by the kinship among cells in the tumor. Indeed, genomic studies have amply supported the ‘Nowell dogma’ whereby cells of the same tumor descend from a single progenitor cell. In parallel, genomic data also suggest that the diversity could be >10-fold larger if tumor cells are of multiple origins. We develop an evolutionary hypothesis that a single tumor may often harbor multiple cell clones of independent origins, but only one would be large enough to be detected. To test the hypothesis, we search for independent tumors within a larger one (or tumors-in-tumor). Very high density sampling was done on two cases of colon tumors. Case 1 indeed has 13 independent clones of disparate sizes, many having heavy mutation burdens and potentially highly tumorigenic. In Case 2, despite a very intensive search, only two small independent clones could be found. The two cases show very similar movements and metastasis of the dominant clone. Cells initially move actively in the expanding tumor but become nearly immobile in late stages. In conclusion, tumors-in-tumor are plausible but could be very demanding to find. Despite their small sizes, they can enhance the within-tumor diversity by orders of magnitude. Such increases may contribute to the missing genetic diversity associated with the resistance to cancer therapy.
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spelling pubmed-98690762023-01-23 Very large hidden genetic diversity in one single tumor: evidence for tumors-in-tumor Chen, Bingjie Wu, Xianrui Ruan, Yongsen Zhang, Yulin Cai, Qichun Zapata, Luis Wu, Chung-I Lan, Ping Wen, Haijun Natl Sci Rev Research Article Despite the concern of within-tumor genetic diversity, this diversity is in fact limited by the kinship among cells in the tumor. Indeed, genomic studies have amply supported the ‘Nowell dogma’ whereby cells of the same tumor descend from a single progenitor cell. In parallel, genomic data also suggest that the diversity could be >10-fold larger if tumor cells are of multiple origins. We develop an evolutionary hypothesis that a single tumor may often harbor multiple cell clones of independent origins, but only one would be large enough to be detected. To test the hypothesis, we search for independent tumors within a larger one (or tumors-in-tumor). Very high density sampling was done on two cases of colon tumors. Case 1 indeed has 13 independent clones of disparate sizes, many having heavy mutation burdens and potentially highly tumorigenic. In Case 2, despite a very intensive search, only two small independent clones could be found. The two cases show very similar movements and metastasis of the dominant clone. Cells initially move actively in the expanding tumor but become nearly immobile in late stages. In conclusion, tumors-in-tumor are plausible but could be very demanding to find. Despite their small sizes, they can enhance the within-tumor diversity by orders of magnitude. Such increases may contribute to the missing genetic diversity associated with the resistance to cancer therapy. Oxford University Press 2022-11-11 /pmc/articles/PMC9869076/ /pubmed/36694802 http://dx.doi.org/10.1093/nsr/nwac250 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of China Science Publishing & Media Ltd. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Chen, Bingjie
Wu, Xianrui
Ruan, Yongsen
Zhang, Yulin
Cai, Qichun
Zapata, Luis
Wu, Chung-I
Lan, Ping
Wen, Haijun
Very large hidden genetic diversity in one single tumor: evidence for tumors-in-tumor
title Very large hidden genetic diversity in one single tumor: evidence for tumors-in-tumor
title_full Very large hidden genetic diversity in one single tumor: evidence for tumors-in-tumor
title_fullStr Very large hidden genetic diversity in one single tumor: evidence for tumors-in-tumor
title_full_unstemmed Very large hidden genetic diversity in one single tumor: evidence for tumors-in-tumor
title_short Very large hidden genetic diversity in one single tumor: evidence for tumors-in-tumor
title_sort very large hidden genetic diversity in one single tumor: evidence for tumors-in-tumor
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9869076/
https://www.ncbi.nlm.nih.gov/pubmed/36694802
http://dx.doi.org/10.1093/nsr/nwac250
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