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Identification of new small molecules as dual FoxM1 and Hsp70 inhibitors using computational methods

BACKGROUND AND PURPOSE: FoxM1 and Hsp70 proteins are highly expressed in many cancers. Thus, their inhibition serves as Bonafede targets in cancer treatment. EXPERIMENTAL APPROACH: FDI-6, an inhibitor of FoxM1, was selected as a template, and based on its structure, a new library from the ZINC datab...

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Autores principales: Alimardan, Zahra, Abbasi, Maryam, Khodarahmi, Ghadamali, Kashfi, Khosrow, Hasanzadeh, Farshid, Mahmud, Aghaei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer - Medknow 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9872178/
https://www.ncbi.nlm.nih.gov/pubmed/36704430
http://dx.doi.org/10.4103/1735-5362.359431
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author Alimardan, Zahra
Abbasi, Maryam
Khodarahmi, Ghadamali
Kashfi, Khosrow
Hasanzadeh, Farshid
Mahmud, Aghaei
author_facet Alimardan, Zahra
Abbasi, Maryam
Khodarahmi, Ghadamali
Kashfi, Khosrow
Hasanzadeh, Farshid
Mahmud, Aghaei
author_sort Alimardan, Zahra
collection PubMed
description BACKGROUND AND PURPOSE: FoxM1 and Hsp70 proteins are highly expressed in many cancers. Thus, their inhibition serves as Bonafede targets in cancer treatment. EXPERIMENTAL APPROACH: FDI-6, an inhibitor of FoxM1, was selected as a template, and based on its structure, a new library from the ZINC database was obtained. Virtual screening was then performed using the created pharmacophore model. The second virtual screening phase was conducted with molecular docking to get the best inhibitor for both FoxM1 and Hsp70 active sites. In silico, ADMET properties were also calculated. Finally, molecular dynamics simulation was performed on the best ligand, ZINC1152745, for both Hsp70 and FoxM1 proteins during 100 ns. FINDINGS / RESULTS: The results of this study indicated that ZINC1152745 was stable in the active site of both proteins, Hsp70 and FoxM1. The final scaffold identified by the presented computational approach could offer a hit compound for designing promising anticancer agents targeting both FoxM1 and Hsp70. CONCLUSION AND IMPLICATIONS: Molecular dynamics simulations were performed on ZINC1152745 targeting FoxM1 and Hsp70 active sites. The results of several hydrogen bonds, the radius of gyration, RMSF, RMSD, and free energy during the simulations showed good stability of ZINC1152745 with FoxM1 and Hsp70.
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spelling pubmed-98721782023-01-25 Identification of new small molecules as dual FoxM1 and Hsp70 inhibitors using computational methods Alimardan, Zahra Abbasi, Maryam Khodarahmi, Ghadamali Kashfi, Khosrow Hasanzadeh, Farshid Mahmud, Aghaei Res Pharm Sci Original Article BACKGROUND AND PURPOSE: FoxM1 and Hsp70 proteins are highly expressed in many cancers. Thus, their inhibition serves as Bonafede targets in cancer treatment. EXPERIMENTAL APPROACH: FDI-6, an inhibitor of FoxM1, was selected as a template, and based on its structure, a new library from the ZINC database was obtained. Virtual screening was then performed using the created pharmacophore model. The second virtual screening phase was conducted with molecular docking to get the best inhibitor for both FoxM1 and Hsp70 active sites. In silico, ADMET properties were also calculated. Finally, molecular dynamics simulation was performed on the best ligand, ZINC1152745, for both Hsp70 and FoxM1 proteins during 100 ns. FINDINGS / RESULTS: The results of this study indicated that ZINC1152745 was stable in the active site of both proteins, Hsp70 and FoxM1. The final scaffold identified by the presented computational approach could offer a hit compound for designing promising anticancer agents targeting both FoxM1 and Hsp70. CONCLUSION AND IMPLICATIONS: Molecular dynamics simulations were performed on ZINC1152745 targeting FoxM1 and Hsp70 active sites. The results of several hydrogen bonds, the radius of gyration, RMSF, RMSD, and free energy during the simulations showed good stability of ZINC1152745 with FoxM1 and Hsp70. Wolters Kluwer - Medknow 2022-10-29 /pmc/articles/PMC9872178/ /pubmed/36704430 http://dx.doi.org/10.4103/1735-5362.359431 Text en Copyright: © 2022 Research in Pharmaceutical Sciences https://creativecommons.org/licenses/by-nc-sa/4.0/This is an open access journal, and articles are distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as appropriate credit is given and the new creations are licensed under the identical terms.
spellingShingle Original Article
Alimardan, Zahra
Abbasi, Maryam
Khodarahmi, Ghadamali
Kashfi, Khosrow
Hasanzadeh, Farshid
Mahmud, Aghaei
Identification of new small molecules as dual FoxM1 and Hsp70 inhibitors using computational methods
title Identification of new small molecules as dual FoxM1 and Hsp70 inhibitors using computational methods
title_full Identification of new small molecules as dual FoxM1 and Hsp70 inhibitors using computational methods
title_fullStr Identification of new small molecules as dual FoxM1 and Hsp70 inhibitors using computational methods
title_full_unstemmed Identification of new small molecules as dual FoxM1 and Hsp70 inhibitors using computational methods
title_short Identification of new small molecules as dual FoxM1 and Hsp70 inhibitors using computational methods
title_sort identification of new small molecules as dual foxm1 and hsp70 inhibitors using computational methods
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9872178/
https://www.ncbi.nlm.nih.gov/pubmed/36704430
http://dx.doi.org/10.4103/1735-5362.359431
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