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Minimal Positional Substring Cover: A Haplotype Threading Alternative to Li & Stephens Model
The Li & Stephens (LS) hidden Markov model (HMM) models the process of reconstructing a haplotype as a mosaic copy of haplotypes in a reference panel (haplotype threading). For small panels the probabilistic parameterization of LS enables modeling the uncertainties of such mosaics, and has been...
| Autores principales: | , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Cold Spring Harbor Laboratory
2023
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9881975/ https://www.ncbi.nlm.nih.gov/pubmed/36711469 http://dx.doi.org/10.1101/2023.01.04.522803 |