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Metadata retrieval from sequence databases with ffq
MOTIVATION: Several genomic databases host data and metadata for an ever-growing collection of sequence datasets. While these databases have a shared hierarchical structure, there are no tools specifically designed to leverage it for metadata extraction. RESULTS: We present a command-line tool, call...
Autores principales: | Gálvez-Merchán, Ángel, Min, Kyung Hoi (Joseph), Pachter, Lior, Booeshaghi, A Sina |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9883619/ https://www.ncbi.nlm.nih.gov/pubmed/36610997 http://dx.doi.org/10.1093/bioinformatics/btac667 |
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