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DrTransformer: heuristic cotranscriptional RNA folding using the nearest neighbor energy model

MOTIVATION: Folding during transcription can have an important influence on the structure and function of RNA molecules, as regions closer to the 5′ end can fold into metastable structures before potentially stronger interactions with the 3′ end become available. Thermodynamic RNA folding models are...

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Detalles Bibliográficos
Autores principales: Badelt, Stefan, Lorenz, Ronny, Hofacker, Ivo L
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9889959/
https://www.ncbi.nlm.nih.gov/pubmed/36655786
http://dx.doi.org/10.1093/bioinformatics/btad034