Snekmer: a scalable pipeline for protein sequence fingerprinting based on amino acid recoding

MOTIVATION: The vast expansion of sequence data generated from single organisms and microbiomes has precipitated the need for faster and more sensitive methods to assess evolutionary and functional relationships between proteins. Representing proteins as sets of short peptide sequences (kmers) has b...

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Detalles Bibliográficos
Autores principales: Chang, Christine H, Nelson, William C, Jerger, Abby, Wright, Aaron T, Egbert, Robert G, McDermott, Jason E
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Original Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913046/
https://www.ncbi.nlm.nih.gov/pubmed/36789294
http://dx.doi.org/10.1093/bioadv/vbad005

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9913046/
https://www.ncbi.nlm.nih.gov/pubmed/36789294
http://dx.doi.org/10.1093/bioadv/vbad005

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