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DandD: efficient measurement of sequence growth and similarity

Genome assembly databases are growing rapidly. The sequence content in each new assembly can be largely redundant with previous ones, but this is neither conceptually nor algorithmically easy to measure. We propose new methods and a new tool called DandD that addresses the question of how much new s...

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Detalles Bibliográficos
Autores principales: Bonnie, Jessica K., Ahmed, Omar, Langmead, Ben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9915590/
https://www.ncbi.nlm.nih.gov/pubmed/36778393
http://dx.doi.org/10.1101/2023.02.02.526837