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Biological Control for Grapevine Crown Gall Evaluated by a Network Meta-Analysis

Grapevine crown gall (GCG), which is caused by Allorhizobium vitis (=Rhizobium vitis) tumorigenic strains, is the most important disease of grapevine around the world. Previously, nonpathogenic A. vitis strains VAR03-1, ARK-1, ARK-2, and ARK-3 were identified as promising biological control agents,...

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Autores principales: Kawaguchi, Akira, Kirino, Namiko, Inoue, Koji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9921260/
https://www.ncbi.nlm.nih.gov/pubmed/36771655
http://dx.doi.org/10.3390/plants12030572
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author Kawaguchi, Akira
Kirino, Namiko
Inoue, Koji
author_facet Kawaguchi, Akira
Kirino, Namiko
Inoue, Koji
author_sort Kawaguchi, Akira
collection PubMed
description Grapevine crown gall (GCG), which is caused by Allorhizobium vitis (=Rhizobium vitis) tumorigenic strains, is the most important disease of grapevine around the world. Previously, nonpathogenic A. vitis strains VAR03-1, ARK-1, ARK-2, and ARK-3 were identified as promising biological control agents, but the control effects of each strain were not directly compared and assessed in the field because field trials were conducted in different fields and years. Thus, the results of the control effects obtained from 16 field trials in 12 years from 2006 to 2017 were analyzed and evaluated by a linear mixed model (LMM) and a network meta-analysis (NMA). The results of the LMM strongly indicate that the factor “antagonistic strain” was significantly related to the biological control activity in this study, but the other factors, “concentration of cell suspension”, “field”, and “year”, were not. Then, the results of 16 field trials were combined in an NMA. The estimated relative risk (RR) after treatment with ARK-1, ARK-2, ARK-3, VAR03-1, and K84 were 0.16, 0.20, 0.22, 0.24, and 0.74, respectively. In conclusion, strain ARK-1 was the best antagonist regardless of the concentration of the cell suspension, field, and year differences, and it can be recommended to control GCG.
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spelling pubmed-99212602023-02-12 Biological Control for Grapevine Crown Gall Evaluated by a Network Meta-Analysis Kawaguchi, Akira Kirino, Namiko Inoue, Koji Plants (Basel) Communication Grapevine crown gall (GCG), which is caused by Allorhizobium vitis (=Rhizobium vitis) tumorigenic strains, is the most important disease of grapevine around the world. Previously, nonpathogenic A. vitis strains VAR03-1, ARK-1, ARK-2, and ARK-3 were identified as promising biological control agents, but the control effects of each strain were not directly compared and assessed in the field because field trials were conducted in different fields and years. Thus, the results of the control effects obtained from 16 field trials in 12 years from 2006 to 2017 were analyzed and evaluated by a linear mixed model (LMM) and a network meta-analysis (NMA). The results of the LMM strongly indicate that the factor “antagonistic strain” was significantly related to the biological control activity in this study, but the other factors, “concentration of cell suspension”, “field”, and “year”, were not. Then, the results of 16 field trials were combined in an NMA. The estimated relative risk (RR) after treatment with ARK-1, ARK-2, ARK-3, VAR03-1, and K84 were 0.16, 0.20, 0.22, 0.24, and 0.74, respectively. In conclusion, strain ARK-1 was the best antagonist regardless of the concentration of the cell suspension, field, and year differences, and it can be recommended to control GCG. MDPI 2023-01-27 /pmc/articles/PMC9921260/ /pubmed/36771655 http://dx.doi.org/10.3390/plants12030572 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Kawaguchi, Akira
Kirino, Namiko
Inoue, Koji
Biological Control for Grapevine Crown Gall Evaluated by a Network Meta-Analysis
title Biological Control for Grapevine Crown Gall Evaluated by a Network Meta-Analysis
title_full Biological Control for Grapevine Crown Gall Evaluated by a Network Meta-Analysis
title_fullStr Biological Control for Grapevine Crown Gall Evaluated by a Network Meta-Analysis
title_full_unstemmed Biological Control for Grapevine Crown Gall Evaluated by a Network Meta-Analysis
title_short Biological Control for Grapevine Crown Gall Evaluated by a Network Meta-Analysis
title_sort biological control for grapevine crown gall evaluated by a network meta-analysis
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9921260/
https://www.ncbi.nlm.nih.gov/pubmed/36771655
http://dx.doi.org/10.3390/plants12030572
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