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Optimized lentiviral vector transduction of adherent cells and analysis in sulforhodamine B proliferation and chromatin immunoprecipitation assays

Transduction with lentiviral vectors is a useful approach to study the molecular function of specific genes in mammalian cells. Here, we present a calcium phosphate-based transfection protocol that guarantees highly efficient production and delivery of lentiviral vectors in adherent cultured cells....

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Detalles Bibliográficos
Autores principales: Li, Luyuan, Trent, Jonathan C., Eid, Josiane E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9943855/
https://www.ncbi.nlm.nih.gov/pubmed/36853730
http://dx.doi.org/10.1016/j.xpro.2023.102109
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author Li, Luyuan
Trent, Jonathan C.
Eid, Josiane E.
author_facet Li, Luyuan
Trent, Jonathan C.
Eid, Josiane E.
author_sort Li, Luyuan
collection PubMed
description Transduction with lentiviral vectors is a useful approach to study the molecular function of specific genes in mammalian cells. Here, we present a calcium phosphate-based transfection protocol that guarantees highly efficient production and delivery of lentiviral vectors in adherent cultured cells. We also describe in detail a direct lysis technique to measure protein expression, an optimized sulforhodamine B proliferation assay, and a step-by-step chromatin immunoprecipitation procedure to verify the binding of ETV5 to E2F1 first intron in SYO-1 sarcoma cells. For complete details on the use and execution of this protocol, please refer to Kingston et al. (2003),(1) Ireton et al. (2002),(2) Brown et al. (2009),(3) DeSalvo et al. (2021),(4) Vichai and Kirtikara (2006),(5) and Boyer et al. (2005).(6)
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spelling pubmed-99438552023-02-23 Optimized lentiviral vector transduction of adherent cells and analysis in sulforhodamine B proliferation and chromatin immunoprecipitation assays Li, Luyuan Trent, Jonathan C. Eid, Josiane E. STAR Protoc Protocol Transduction with lentiviral vectors is a useful approach to study the molecular function of specific genes in mammalian cells. Here, we present a calcium phosphate-based transfection protocol that guarantees highly efficient production and delivery of lentiviral vectors in adherent cultured cells. We also describe in detail a direct lysis technique to measure protein expression, an optimized sulforhodamine B proliferation assay, and a step-by-step chromatin immunoprecipitation procedure to verify the binding of ETV5 to E2F1 first intron in SYO-1 sarcoma cells. For complete details on the use and execution of this protocol, please refer to Kingston et al. (2003),(1) Ireton et al. (2002),(2) Brown et al. (2009),(3) DeSalvo et al. (2021),(4) Vichai and Kirtikara (2006),(5) and Boyer et al. (2005).(6) Elsevier 2023-02-09 /pmc/articles/PMC9943855/ /pubmed/36853730 http://dx.doi.org/10.1016/j.xpro.2023.102109 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Protocol
Li, Luyuan
Trent, Jonathan C.
Eid, Josiane E.
Optimized lentiviral vector transduction of adherent cells and analysis in sulforhodamine B proliferation and chromatin immunoprecipitation assays
title Optimized lentiviral vector transduction of adherent cells and analysis in sulforhodamine B proliferation and chromatin immunoprecipitation assays
title_full Optimized lentiviral vector transduction of adherent cells and analysis in sulforhodamine B proliferation and chromatin immunoprecipitation assays
title_fullStr Optimized lentiviral vector transduction of adherent cells and analysis in sulforhodamine B proliferation and chromatin immunoprecipitation assays
title_full_unstemmed Optimized lentiviral vector transduction of adherent cells and analysis in sulforhodamine B proliferation and chromatin immunoprecipitation assays
title_short Optimized lentiviral vector transduction of adherent cells and analysis in sulforhodamine B proliferation and chromatin immunoprecipitation assays
title_sort optimized lentiviral vector transduction of adherent cells and analysis in sulforhodamine b proliferation and chromatin immunoprecipitation assays
topic Protocol
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9943855/
https://www.ncbi.nlm.nih.gov/pubmed/36853730
http://dx.doi.org/10.1016/j.xpro.2023.102109
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