Cargando…

High-throughput droplet-based analysis of influenza A virus genetic reassortment by single-virus RNA sequencing

The segmented RNA genome of influenza A viruses (IAVs) enables viral evolution through genetic reassortment after multiple IAVs coinfect the same cell, leading to viruses harboring combinations of eight genomic segments from distinct parental viruses. Existing data indicate that reassortant genotype...

Descripción completa

Detalles Bibliográficos
Autores principales:	Chen, Kuang-Yu, Karuppusamy, Jayaprakash, O’Neill, Mary B., Opuu, Vaitea, Bahin, Mathieu, Foulon, Sophie, Ibanez, Pablo, Quintana-Murci, Lluis, Ozawa, Tatsuhiko, van der Werf, Sylvie, Nghe, Philippe, Naffakh, Nadia, Griffiths, Andrew, Isel, Catherine
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	National Academy of Sciences 2023
Materias:	Physical Sciences
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9963642/ https://www.ncbi.nlm.nih.gov/pubmed/36730204 http://dx.doi.org/10.1073/pnas.2211098120

Ejemplares similares

Experimental Approaches to Study Genome Packaging of Influenza A Viruses
por: Isel, Catherine, et al.
Publicado: (2016)

Computational design of fully overlapping coding schemes for protein pairs and triplets
por: Opuu, Vaitea, et al.
Publicado: (2017)

RAFFT: Efficient prediction of RNA folding pathways using the fast Fourier transform
por: Opuu, Vaitea, et al.
Publicado: (2022)

Adaptive landscape flattening allows the design of both enzyme: Substrate binding and catalytic power
por: Opuu, Vaitea, et al.
Publicado: (2020)

Influenza virus polymerase subunits co-evolve to ensure proper levels of dimerization of the heterotrimer
por: Chen, Kuang-Yu, et al.
Publicado: (2019)

Single-Cell and Bulk RNA-Sequencing Reveal Differences in Monocyte Susceptibility to Influenza A Virus Infection Between Africans and Europeans
por: O’Neill, Mary B., et al.
Publicado: (2021)

Reassortment Patterns in Swine Influenza Viruses
por: Khiabanian, Hossein, et al.
Publicado: (2009)

Predicting Hotspots for Influenza Virus Reassortment
por: Fuller, Trevon L., et al.
Publicado: (2013)

Reassortment Network of Influenza A Virus
por: Gong, Xingfei, et al.
Publicado: (2021)

Influenza B Virus Infection Is Enhanced Upon Heterotypic Co-infection With Influenza A Virus
por: Malausse, Nicolas, et al.
Publicado: (2021)

Bayesian inference of reassortment networks reveals fitness benefits of reassortment in human influenza viruses
por: Müller, Nicola F., et al.
Publicado: (2020)

A physics-based energy function allows the computational redesign of a PDZ domain
por: Opuu, Vaitea, et al.
Publicado: (2020)

VIRAPOPS2 supports the influenza virus reassortments
por: Petitjean, Michel, et al.
Publicado: (2014)

Generation of bat-derived influenza viruses and their reassortants
por: Sato, Masahiro, et al.
Publicado: (2019)

Reassortment of bluetongue virus vaccine serotypes in cattle
por: van den Bergh, Carien, et al.
Publicado: (2018)

Influenza A virus reassortment is strain dependent
por: Taylor, Kishana Y., et al.
Publicado: (2023)

A Novel Reassortant Avian H7N6 Influenza Virus Is Transmissible in Guinea Pigs via Respiratory Droplets
por: Zhao, Zongzheng, et al.
Publicado: (2019)

Human genome variability and host-pathogen interactions
por: Quintana-Murci, Lluis
Publicado: (2009)

Understanding rare and common diseases in the context of human evolution
por: Quintana-Murci, Lluis
Publicado: (2016)

Potential for La Crosse virus segment reassortment in nature
por: Reese, Sara M, et al.
Publicado: (2008)

Novel Swine Influenza Virus Reassortants in Pigs, China
por: Bi, Yuhai, et al.
Publicado: (2010)

A comprehensive analysis of reassortment in influenza A virus
por: de Silva, U. Chandimal, et al.
Publicado: (2012)

Non‐random reassortment in human influenza A viruses
por: Rabadan, Raul, et al.
Publicado: (2008)

Experimental adaptation of an influenza H5 haemagglutinin (HA) confers respiratory droplet transmission to a reassortant H5 HA/H1N1 virus in ferrets
por: Imai, Masaki, et al.
Publicado: (2012)

Virus persistence in pig herds led to successive reassortment events between swine and human influenza A viruses, resulting in the emergence of a novel triple-reassortant swine influenza virus
por: Chastagner, Amélie, et al.
Publicado: (2019)

Proteotyping to Establish Gene Origin within Reassortant Influenza Viruses
por: Ha, Ji-won, et al.
Publicado: (2011)

Novel triple-reassortant influenza viruses in pigs, Guangxi, China
por: He, Ping, et al.
Publicado: (2018)

Joint Inference of Migration and Reassortment Patterns for Viruses with Segmented Genomes
por: Stolz, Ugnė, et al.
Publicado: (2021)

TreeKnit: Inferring ancestral reassortment graphs of influenza viruses
por: Barrat-Charlaix, Pierre, et al.
Publicado: (2022)

Diversity and Genetic Reassortment of Keystone Virus in Mosquito Populations in Florida
por: Elbadry, Maha A., et al.
Publicado: (2023)

Evolution and Reassortment of H6 Subtype Avian Influenza Viruses
por: Lin, Mingqin, et al.
Publicado: (2023)

Evolutionary genetics as a tool to target genes involved in phenotypes of medical relevance
por: Heyer, Evelyne, et al.
Publicado: (2009)

Sexual Inequality in Tuberculosis
por: Neyrolles, Olivier, et al.
Publicado: (2009)

The human Y chromosome: the biological role of a “functional wasteland”
por: Quintana-Murci, Lluís, et al.
Publicado: (2001)

The impact of natural selection on health and disease: uses of the population genetics approach in humans
por: Vasseur, Estelle, et al.
Publicado: (2013)

Living in an adaptive world: Genomic dissection of the genus Homo and its immune response
por: Quach, Hélène, et al.
Publicado: (2017)

Functional consequences of archaic introgression and their impact on fitness
por: Rotival, Maxime, et al.
Publicado: (2020)

The genetic and evolutionary determinants of COVID-19 susceptibility
por: Kerner, Gaspard, et al.
Publicado: (2022)

Rapid Detection and Subtyping of Human Influenza A Viruses and Reassortants by Pyrosequencing
por: Deng, Yi-Mo, et al.
Publicado: (2011)

Estimating reassortment rates in co-circulating Eurasian swine influenza viruses
por: Lycett, S. J., et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_8c5uha4gh0kgkig3eqh73siq9p