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Generalizations of the genomic rank distance to indels

MOTIVATION: The rank distance model represents genome rearrangements in multi-chromosomal genomes as matrix operations, which allows the reconstruction of parsimonious histories of evolution by rearrangements. We seek to generalize this model by allowing for genomes with different gene content, to a...

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Detalles Bibliográficos
Autores principales: Pereira Zanetti, João Paulo, Peres Oliveira, Lucas, Chindelevitch, Leonid, Meidanis, João
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9985151/
https://www.ncbi.nlm.nih.gov/pubmed/36790056
http://dx.doi.org/10.1093/bioinformatics/btad087