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Thermostability modification of β-mannanase from Aspergillus niger via flexibility modification engineering
INTRODUCTION: β-Mannanases can hydrolyze mannans, which are widely available in nature. However, the optimum temperature of most β-mannanases is too low to be directly utilized in industry. METHODS: To further improve the thermostability of Anman (mannanase from Aspergillus niger CBS513.88), B-facto...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9986629/ https://www.ncbi.nlm.nih.gov/pubmed/36891394 http://dx.doi.org/10.3389/fmicb.2023.1119232 |
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author | Tan, Shundong Tao, Xiumei Zheng, Pu Chen, Pengcheng Yu, Xiaowei Li, Ning Gao, Tiecheng Wu, Dan |
author_facet | Tan, Shundong Tao, Xiumei Zheng, Pu Chen, Pengcheng Yu, Xiaowei Li, Ning Gao, Tiecheng Wu, Dan |
author_sort | Tan, Shundong |
collection | PubMed |
description | INTRODUCTION: β-Mannanases can hydrolyze mannans, which are widely available in nature. However, the optimum temperature of most β-mannanases is too low to be directly utilized in industry. METHODS: To further improve the thermostability of Anman (mannanase from Aspergillus niger CBS513.88), B-factor and Gibbs unfolding free energy change were used to modify the flexible of Anman, and then combined with multiple sequence alignment and consensus mutation to generate an excellent mutant. At last, we analyzed the intermolecular forces between Anman and the mutant by molecular dynamics simulation. RESULTS: The thermostability of combined mutant mut5 (E15C/S65P/A84P/A195P/T298P) was increased by 70% than the wild-type Amman at 70°C, and the melting temperature (Tm) and half-life (t1/2) values were increased by 2°C and 7.8-folds, respectively. Molecular dynamics simulation showed reduced flexibility and additional chemical bonds in the region near the mutation site. DISCUSSION: These results indicate that we obtained a Anman mutant that is more suitable for industrial application, and they also confirm that a combination of rational and semi-rational techniques is helpful for screening mutant sites. |
format | Online Article Text |
id | pubmed-9986629 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99866292023-03-07 Thermostability modification of β-mannanase from Aspergillus niger via flexibility modification engineering Tan, Shundong Tao, Xiumei Zheng, Pu Chen, Pengcheng Yu, Xiaowei Li, Ning Gao, Tiecheng Wu, Dan Front Microbiol Microbiology INTRODUCTION: β-Mannanases can hydrolyze mannans, which are widely available in nature. However, the optimum temperature of most β-mannanases is too low to be directly utilized in industry. METHODS: To further improve the thermostability of Anman (mannanase from Aspergillus niger CBS513.88), B-factor and Gibbs unfolding free energy change were used to modify the flexible of Anman, and then combined with multiple sequence alignment and consensus mutation to generate an excellent mutant. At last, we analyzed the intermolecular forces between Anman and the mutant by molecular dynamics simulation. RESULTS: The thermostability of combined mutant mut5 (E15C/S65P/A84P/A195P/T298P) was increased by 70% than the wild-type Amman at 70°C, and the melting temperature (Tm) and half-life (t1/2) values were increased by 2°C and 7.8-folds, respectively. Molecular dynamics simulation showed reduced flexibility and additional chemical bonds in the region near the mutation site. DISCUSSION: These results indicate that we obtained a Anman mutant that is more suitable for industrial application, and they also confirm that a combination of rational and semi-rational techniques is helpful for screening mutant sites. Frontiers Media S.A. 2023-02-20 /pmc/articles/PMC9986629/ /pubmed/36891394 http://dx.doi.org/10.3389/fmicb.2023.1119232 Text en Copyright © 2023 Tan, Tao, Zheng, Chen, Yu, Li, Gao and Wu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Tan, Shundong Tao, Xiumei Zheng, Pu Chen, Pengcheng Yu, Xiaowei Li, Ning Gao, Tiecheng Wu, Dan Thermostability modification of β-mannanase from Aspergillus niger via flexibility modification engineering |
title | Thermostability modification of β-mannanase from Aspergillus niger via flexibility modification engineering |
title_full | Thermostability modification of β-mannanase from Aspergillus niger via flexibility modification engineering |
title_fullStr | Thermostability modification of β-mannanase from Aspergillus niger via flexibility modification engineering |
title_full_unstemmed | Thermostability modification of β-mannanase from Aspergillus niger via flexibility modification engineering |
title_short | Thermostability modification of β-mannanase from Aspergillus niger via flexibility modification engineering |
title_sort | thermostability modification of β-mannanase from aspergillus niger via flexibility modification engineering |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9986629/ https://www.ncbi.nlm.nih.gov/pubmed/36891394 http://dx.doi.org/10.3389/fmicb.2023.1119232 |
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