POSMM: an efficient alignment-free metagenomic profiler that complements alignment-based profiling

We present here POSMM (pronounced ‘Possum’), Python-Optimized Standard Markov Model classifier, which is a new incarnation of the Markov model approach to metagenomic sequence analysis. Built on the top of a rapid Markov model based classification algorithm SMM, POSMM reintroduces high sensitivity a...

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Detalles Bibliográficos
Autores principales: Burks, David J., Pusadkar, Vaidehi, Azad, Rajeev K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9993663/
https://www.ncbi.nlm.nih.gov/pubmed/36890583
http://dx.doi.org/10.1186/s40793-023-00476-y

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9993663/
https://www.ncbi.nlm.nih.gov/pubmed/36890583
http://dx.doi.org/10.1186/s40793-023-00476-y

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