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Identification of stress resilience module by weighted gene co-expression network analysis in Fkbp5-deficient mice

FKBP5 encodes the FK506 binding protein 5, a glucocorticoid receptor (GR) binding protein known to play an important role in the physiological stress response. However, results from previous studies examining the association between common variants of FKBP5 and stress have been inconsistent. To inve...

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Autores principales: Kwon, Joonhong, Kim, Yeong Jae, Choi, Koeul, Seol, Sihwan, Kang, Hyo Jung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6882145/
https://www.ncbi.nlm.nih.gov/pubmed/31775900
http://dx.doi.org/10.1186/s13041-019-0521-9
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author Kwon, Joonhong
Kim, Yeong Jae
Choi, Koeul
Seol, Sihwan
Kang, Hyo Jung
author_facet Kwon, Joonhong
Kim, Yeong Jae
Choi, Koeul
Seol, Sihwan
Kang, Hyo Jung
author_sort Kwon, Joonhong
collection PubMed
description FKBP5 encodes the FK506 binding protein 5, a glucocorticoid receptor (GR) binding protein known to play an important role in the physiological stress response. However, results from previous studies examining the association between common variants of FKBP5 and stress have been inconsistent. To investigate whether the loss of FKBP5 affects the stress response, we examined the behavior of mice following the induction of chronic restraint stress between homozygous wild-type and Fkbp5 knock-out mice. After 21 days of exposure to restraint stress, WT mice showed anhedonia, a core symptom of depression, which could be measured by a sucrose preference test. However, Fkbp5-deficient mice did not exhibit significant depressive-like behavior compared to the WT after exposure to chronic restraint stress. To investigate the molecular mechanism underlying stress resilience, we performed RNA sequencing analysis. The differentially expressed gene (DEG) analysis showed that chronic stress induced changes in various biological processes involved in cell-cell adhesion and inflammatory response. Weighted gene co-expression network analysis identified 60 characteristic modules that correlated with stress or the FKBP5 genotype. Among them, M55 showed a gene expression pattern consistent with behavioral changes after stress exposure, and the gene ontology analysis revealed that this was involved in nervous system development, gland morphogenesis, and inflammatory response. These results suggest that FKBP5 may be a crucial factor for the stress response, and that transcriptomic data can provide insight into stress-related pathophysiology.
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spelling pubmed-68821452019-12-03 Identification of stress resilience module by weighted gene co-expression network analysis in Fkbp5-deficient mice Kwon, Joonhong Kim, Yeong Jae Choi, Koeul Seol, Sihwan Kang, Hyo Jung Mol Brain Micro Report FKBP5 encodes the FK506 binding protein 5, a glucocorticoid receptor (GR) binding protein known to play an important role in the physiological stress response. However, results from previous studies examining the association between common variants of FKBP5 and stress have been inconsistent. To investigate whether the loss of FKBP5 affects the stress response, we examined the behavior of mice following the induction of chronic restraint stress between homozygous wild-type and Fkbp5 knock-out mice. After 21 days of exposure to restraint stress, WT mice showed anhedonia, a core symptom of depression, which could be measured by a sucrose preference test. However, Fkbp5-deficient mice did not exhibit significant depressive-like behavior compared to the WT after exposure to chronic restraint stress. To investigate the molecular mechanism underlying stress resilience, we performed RNA sequencing analysis. The differentially expressed gene (DEG) analysis showed that chronic stress induced changes in various biological processes involved in cell-cell adhesion and inflammatory response. Weighted gene co-expression network analysis identified 60 characteristic modules that correlated with stress or the FKBP5 genotype. Among them, M55 showed a gene expression pattern consistent with behavioral changes after stress exposure, and the gene ontology analysis revealed that this was involved in nervous system development, gland morphogenesis, and inflammatory response. These results suggest that FKBP5 may be a crucial factor for the stress response, and that transcriptomic data can provide insight into stress-related pathophysiology. BioMed Central 2019-11-27 /pmc/articles/PMC6882145/ /pubmed/31775900 http://dx.doi.org/10.1186/s13041-019-0521-9 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Micro Report
Kwon, Joonhong
Kim, Yeong Jae
Choi, Koeul
Seol, Sihwan
Kang, Hyo Jung
Identification of stress resilience module by weighted gene co-expression network analysis in Fkbp5-deficient mice
title Identification of stress resilience module by weighted gene co-expression network analysis in Fkbp5-deficient mice
title_full Identification of stress resilience module by weighted gene co-expression network analysis in Fkbp5-deficient mice
title_fullStr Identification of stress resilience module by weighted gene co-expression network analysis in Fkbp5-deficient mice
title_full_unstemmed Identification of stress resilience module by weighted gene co-expression network analysis in Fkbp5-deficient mice
title_short Identification of stress resilience module by weighted gene co-expression network analysis in Fkbp5-deficient mice
title_sort identification of stress resilience module by weighted gene co-expression network analysis in fkbp5-deficient mice
topic Micro Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6882145/
https://www.ncbi.nlm.nih.gov/pubmed/31775900
http://dx.doi.org/10.1186/s13041-019-0521-9
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