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Hamming-shifting graph of genomic short reads: Efficient construction and its application for compression
Graphs such as de Bruijn graphs and OLC (overlap-layout-consensus) graphs have been widely adopted for the de novo assembly of genomic short reads. This work studies another important problem in the field: how graphs can be used for high-performance compression of the large-scale sequencing data. We...
| Autores principales: | , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
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Public Library of Science
2021
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8321399/ https://www.ncbi.nlm.nih.gov/pubmed/34280186 http://dx.doi.org/10.1371/journal.pcbi.1009229 |