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Detection of the Microbial Composition of Some Commercial Fermented Liquid Products via Metagenomic Analysis

The fermented liquid sector is developing all over the world due to its contribution to health. Our study has contributed to the debate about whether industrially manufactured fermented liquids live up to their claims by analyzing pathogens and beneficial bacteria using a 16S rRNA sequencing techniq...

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Autores principales: Çelik Doğan, Cansu, Yüksel Dolgun, Hafize Tuğba, İkiz, Serkan, Kırkan, Şükrü, Parın, Uğur
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10572611/
https://www.ncbi.nlm.nih.gov/pubmed/37835192
http://dx.doi.org/10.3390/foods12193538
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author Çelik Doğan, Cansu
Yüksel Dolgun, Hafize Tuğba
İkiz, Serkan
Kırkan, Şükrü
Parın, Uğur
author_facet Çelik Doğan, Cansu
Yüksel Dolgun, Hafize Tuğba
İkiz, Serkan
Kırkan, Şükrü
Parın, Uğur
author_sort Çelik Doğan, Cansu
collection PubMed
description The fermented liquid sector is developing all over the world due to its contribution to health. Our study has contributed to the debate about whether industrially manufactured fermented liquids live up to their claims by analyzing pathogens and beneficial bacteria using a 16S rRNA sequencing technique called metagenomic analysis. Paenibacillus, Lentibacillus, Bacillus, Enterococcus, Levilactobacillus, and Oenococcus were the most abundant bacterial genera observed as potential probiotics. Pseudomonas stutzeri, Acinetobacter, and Collimonas, which have plant-growth-promoting traits, were also detected. The fact that we encounter biocontroller bacteria that promote plant growth demonstrates that these organisms are widely used in foods and emphasizes the necessity of evaluating them in terms of public health. Their potential applications in agriculture may pose a danger to food hygiene and human health in the long term, so our data suggest that this should be evaluated.
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spelling pubmed-105726112023-10-14 Detection of the Microbial Composition of Some Commercial Fermented Liquid Products via Metagenomic Analysis Çelik Doğan, Cansu Yüksel Dolgun, Hafize Tuğba İkiz, Serkan Kırkan, Şükrü Parın, Uğur Foods Article The fermented liquid sector is developing all over the world due to its contribution to health. Our study has contributed to the debate about whether industrially manufactured fermented liquids live up to their claims by analyzing pathogens and beneficial bacteria using a 16S rRNA sequencing technique called metagenomic analysis. Paenibacillus, Lentibacillus, Bacillus, Enterococcus, Levilactobacillus, and Oenococcus were the most abundant bacterial genera observed as potential probiotics. Pseudomonas stutzeri, Acinetobacter, and Collimonas, which have plant-growth-promoting traits, were also detected. The fact that we encounter biocontroller bacteria that promote plant growth demonstrates that these organisms are widely used in foods and emphasizes the necessity of evaluating them in terms of public health. Their potential applications in agriculture may pose a danger to food hygiene and human health in the long term, so our data suggest that this should be evaluated. MDPI 2023-09-22 /pmc/articles/PMC10572611/ /pubmed/37835192 http://dx.doi.org/10.3390/foods12193538 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Çelik Doğan, Cansu
Yüksel Dolgun, Hafize Tuğba
İkiz, Serkan
Kırkan, Şükrü
Parın, Uğur
Detection of the Microbial Composition of Some Commercial Fermented Liquid Products via Metagenomic Analysis
title Detection of the Microbial Composition of Some Commercial Fermented Liquid Products via Metagenomic Analysis
title_full Detection of the Microbial Composition of Some Commercial Fermented Liquid Products via Metagenomic Analysis
title_fullStr Detection of the Microbial Composition of Some Commercial Fermented Liquid Products via Metagenomic Analysis
title_full_unstemmed Detection of the Microbial Composition of Some Commercial Fermented Liquid Products via Metagenomic Analysis
title_short Detection of the Microbial Composition of Some Commercial Fermented Liquid Products via Metagenomic Analysis
title_sort detection of the microbial composition of some commercial fermented liquid products via metagenomic analysis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10572611/
https://www.ncbi.nlm.nih.gov/pubmed/37835192
http://dx.doi.org/10.3390/foods12193538
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