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Analysis of a small outbreak of Shiga toxin-producing Escherichia coli O157:H7 using long-read sequencing

Compared to short-read sequencing data, long-read sequencing facilitates single contiguous de novo assemblies and characterization of the prophage region of the genome. Here, we describe our methodological approach to using Oxford Nanopore Technology (ONT) sequencing data to quantify genetic related...

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Detalles Bibliográficos
Autores principales:	Greig, David R., Jenkins, Claire, Gharbia, Saheer E., Dallman, Timothy J.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Microbiology Society 2021
Materias:	Outbreak Reports
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8190617/ https://www.ncbi.nlm.nih.gov/pubmed/33683192 http://dx.doi.org/10.1099/mgen.0.000545

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