SPRISS: approximating frequent k-mers by sampling reads, and applications
MOTIVATION: The extraction of k-mers is a fundamental component in many complex analyses of large next-generation sequencing datasets, including reads classification in genomics and the characterization of RNA-seq datasets. The extraction of all k-mers and their frequencies is extremely demanding in...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9237683/ https://www.ncbi.nlm.nih.gov/pubmed/35583271 http://dx.doi.org/10.1093/bioinformatics/btac180 |