Cargando…

Structural dynamics and determinants of 2-aminoadenine specificity in DNA polymerase DpoZ of vibriophage ϕVC8

All genetic information in cellular life is stored in DNA copolymers composed of four basic building blocks (ATGC-DNA). In contrast, a group of bacteriophages belonging to families Siphoviridae and Podoviridae has abandoned the usage of one of them, adenine (A), replacing it with 2-aminoadenine (Z)....

Descripción completa

Detalles Bibliográficos
Autores principales:	Czernecki, Dariusz, Hu, Haidai, Romoli, Filippo, Delarue, Marc
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2021
Materias:	Structural Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8599892/ https://www.ncbi.nlm.nih.gov/pubmed/34751404 http://dx.doi.org/10.1093/nar/gkab955

Ejemplares similares

Characterization of a triad of genes in cyanophage S-2L sufficient to replace adenine by 2-aminoadenine in bacterial DNA
por: Czernecki, Dariusz, et al.
Publicado: (2021)

How cyanophage S-2L rejects adenine and incorporates 2-aminoadenine to saturate hydrogen bonding in its DNA
por: Czernecki, Dariusz, et al.
Publicado: (2021)

Structural explanation for the role of Mn(2+) in the activity of ϕ6 RNA-dependent RNA polymerase
por: Poranen, Minna M., et al.
Publicado: (2008)

Cholera and Cholera-Like Vibriophages
por: Pasricha, C. L., et al.
Publicado: (1932)

Genome Characterization and Infectivity Potential of Vibriophage-ϕLV6 with Lytic Activity against Luminescent Vibrios of Penaeus vannamei Shrimp Aquaculture
por: Benala, Manikantha, et al.
Publicado: (2023)

Reclassification of family A DNA polymerases reveals novel functional subfamilies and distinctive structural features
por: Czernecki, Dariusz, et al.
Publicado: (2023)

Physicochemical characterization of vibriophage N5
por: Sen, Anindito, et al.
Publicado: (2005)

Mechanism of aromatic amine carcinogen bypass by the Y-family polymerase, Dpo4
por: Brenlla, Alfonso, et al.
Publicado: (2015)

Structure of the RNA claw of the DNA packaging motor of bacteriophage ϕ29
por: Harjes, Elena, et al.
Publicado: (2012)

Characterization of a Vibriophage Infecting Pathogenic Vibrio harveyi
por: Li, Yingying, et al.
Publicado: (2023)

Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion
por: Rechkoblit, Olga, et al.
Publicado: (2006)

Nucleotide selection by the Y-family DNA polymerase Dpo4 involves template translocation and misalignment
por: Brenlla, Alfonso, et al.
Publicado: (2014)

Binding-Induced Conformational Changes Involved in Sliding Clamp PCNA and DNA Polymerase DPO4
por: Chu, Wen-Ting, et al.
Publicado: (2020)

Neutron-proton total cross-sections between 8 GeVc and 21 GeVc
por: Engler, J, et al.
Publicado: (1970)

Video conference IMC17 ATLAS Z (VC1)
por: CERN. Geneva
Publicado: (2017)

Fast and efficient purification of SARS-CoV-2 RNA dependent RNA polymerase complex expressed in Escherichia coli
por: Madru, Clément, et al.
Publicado: (2021)

RecA-mediated strand invasion of DNA by oligonucleotides substituted with 2-aminoadenine and 2-thiothymine
por: Lahoud, Georges, et al.
Publicado: (2008)

Computational Evaluation of Nucleotide Insertion Opposite Expanded and Widened DNA by the Translesion Synthesis Polymerase Dpo4
por: Albrecht, Laura, et al.
Publicado: (2016)

Novel dimeric structure of phage ϕ29-encoded protein p56: insights into uracil-DNA glycosylase inhibition
por: Asensio, Juan Luis, et al.
Publicado: (2011)

DPO: Direct Planar Odometry with Stereo Camera
por: Lins, Filipe C. A., et al.
Publicado: (2023)

Crystal structure and functional insights into uracil-DNA glycosylase inhibition by phage ϕ29 DNA mimic protein p56
por: Baños-Sanz, José Ignacio, et al.
Publicado: (2013)

Nucleus-forming vibriophage cocktail reduces shrimp mortality in the presence of pathogenic bacteria
por: Thammatinna, Khrongkhwan, et al.
Publicado: (2023)

DPO: Diffuse Pulmonary Ossification – A Diagnostic Challenge
por: Rea, G., et al.
Publicado: (2021)

Mechanism of error-free and semi-targeted mutagenic bypass of an aromatic amine lesion by Y-family polymerase Dpo4
por: Rechkoblit, Olga, et al.
Publicado: (2010)

A novel vibriophage exhibits inhibitory activity against host protein synthesis machinery
por: Thammatinna, Khrongkhwan, et al.
Publicado: (2020)

Development of a Monoclonal Antibody to a Vibriophage as a Proxy for Vibrio cholerae Detection
por: Sayeed, Md Abu, et al.
Publicado: (2022)

JIG V.C.
por: Roux, J M
Publicado: (1986)

A Chemical Approach to Introduce 2,6-Diaminopurine and 2-Aminoadenine Conjugates into Oligonucleotides without Need for Protecting Groups
por: Madaoui, Mimouna, et al.
Publicado: (2022)

Structural and Functional Analysis of Sulfolobus solfataricus Y-Family DNA Polymerase Dpo4-Catalyzed Bypass of the Malondialdehyde−Deoxyguanosine Adduct(,)
por: Eoff, Robert L., et al.
Publicado: (2009)

Nucleotide binding interactions modulate dNTP selectivity and facilitate 8-oxo-dGTP incorporation by DNA polymerase lambda
por: Burak, Matthew J., et al.
Publicado: (2015)

VC in HEP: Status and Perpective
por: Galvez, Philippe
Publicado: (2012)

Ring-Opening of the γ-OH-PdG Adduct Promotes Error-Free Bypass by the Sulfolobus solfataricus DNA Polymerase Dpo4
por: Shanmugam, Ganesh, et al.
Publicado: (2013)

Lost in interpretation: should the highest VC value be used to calculate the FEV(1)/VC ratio?
por: Fortis, Spyridon
Publicado: (2016)

The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZα(ADAR1)
por: Ha, Sung Chul, et al.
Publicado: (2009)

Isolation and Characterization of a Lytic Vibriophage OY1 and Its Biocontrol Effects Against Vibrio spp.
por: Gao, Lu, et al.
Publicado: (2022)

E. fischeriana Root Compound Dpo Activates Antiviral Innate Immunity
por: Chen, Jingxuan, et al.
Publicado: (2017)

Bulky Lesion Bypass Requires Dpo4 Binding in Distinct Conformations
por: Liyanage, Pramodha S., et al.
Publicado: (2017)

Dual conformational recognition by Z-DNA binding protein is important for the B–Z transition process
por: Park, Chaehee, et al.
Publicado: (2020)

Deaminated purine bypass by DNA polymerase η
por: Andreeva, Antonina
Publicado: (2021)

Structure of an inactive RNA polymerase II dimer
por: Aibara, Shintaro, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_k46fqrhfu6ac0benj8f3u6vlh5